Transcript: ENST00000511470.1 C6-009

Description

complement component 6 [Source:HGNC Symbol;Acc:1339]

Location

Chromosome 5: 41,155,161-41,160,471 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 2503 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSG00000039537.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263413.3	C6-001	3661	934aa	ENSP00000263413.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3936	C9JC72 C9JX36 P13671	NM_001115131.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337836.5	C6-002	3551	934aa	ENSP00000338861.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3936	C9JC72 C9JX36 P13671	NM_000065.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417809.1	C6-004	530	133aa	ENSP00000396565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC72 C9JX36	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433294.1	C6-003	490	31aa	ENSP00000401578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JX36	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475349.1	C6-005	1015	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461473.1	C6-007	613	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473450.1	C6-006	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511470.1	C6-009	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 558 bps,

Version

ENST00000511470.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000369269 (version 1)

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Transcript: ENST00000511470.1 C6-009

Summary