Description
macrophage scavenger receptor 1 [Source:HGNC Symbol;Acc:7376]
Gene Synonyms
CD204, SCARA1, SR-A, SRA, phSR1, phSR2
Location
Chromosome 8: 16,225,595-16,240,837 reverse strand.
About this transcript
This transcript has 2 exons, is associated with 8430 variant alleles and maps to 58 oligo probes.
Gene
This transcript is a product of gene ENSG00000038945.10 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000262101.5 | MSR1-001 | 2132 | 451aa | ENSP00000262101.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5995 | E5RFW8 P21757 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000350896.3 | MSR1-201 | 3572 | 388aa | ENSP00000262100.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5996 | E5RFW8 P21757 | NM_138716.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000381998.4 | MSR1-003 | 2826 | 358aa | ENSP00000371428.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5997 | E5RFW8 F5GZJ2 P21757 | NM_002445.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000445506.2 | MSR1-004 | 1513 | 469aa | ENSP00000405453.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DDJ5 E5RFW8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000355282.2 | MSR1-002 | 1167 | 388aa | ENSP00000347430.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5996 | E5RFW8 P21757 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000536385.1 | MSR1-202 | 955 | 132aa | ENSP00000444414.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZJ2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000522672.1 | MSR1-006 | 695 | 149aa | ENSP00000430536.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YBY2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000518026.1 | MSR1-007 | 530 | 58aa | ENSP00000429498.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RI91 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000518960.1 | MSR1-008 | 353 | 64aa | ENSP00000427905.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFW8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000519060.2 | MSR1-005 | 1009 | 37aa | ENSP00000428865.1 | Nonsense mediated decay | E5RFI4 | - | - | |
| ENST00000518343.1 | MSR1-010 | 597 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000521876.1 | MSR1-011 | 540 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000522130.1 | MSR1-009 | 489 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000517522.1 | MSR1-013 | 403 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000520846.1 | MSR1-012 | 373 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |