Transcript: ENST00000519719.1 MAT2B-010

Description

methionine adenosyltransferase II, beta [Source:HGNC Symbol;Acc:6905]

Gene Synonyms

MAT-II, MATIIbeta, Nbla02999, SDR23E1, TGR

Location

Chromosome 5: 162,930,258-162,939,406 forward strand.

About this transcript

This transcript has 2 exons, is associated with 4481 variant alleles and maps to 102 oligo probes.

Gene

This transcript is a product of gene ENSG00000038274.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000321757.6	MAT2B-002	2103	334aa	ENSP00000325425.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4365	Q9NZL9	NM_013283.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518095.1	MAT2B-004	3409	259aa	ENSP00000428046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NZL9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000280969.5	MAT2B-001	2226	323aa	ENSP00000280969.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4364	Q9NZL9	NM_182796.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421814.2	MAT2B-012	698	198aa	ENSP00000397371.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C0X7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520449.1	MAT2B-011	557	117aa	ENSP00000431071.1	Nonsense mediated decay		E5RJR3	-	-
ENST00000521838.2	MAT2B-007	1526	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523606.1	MAT2B-005	3210	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519719.1	MAT2B-010	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 572 bps,

Version

ENST00000519719.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000374194 (version 1)

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Transcript: ENST00000519719.1 MAT2B-010

Summary