Transcript: ENST00000506853.1 AGA-003

Description

aspartylglucosaminidase [Source:HGNC Symbol;Acc:318]

Gene Synonyms

AGU, ASRG, GA

Location

Chromosome 4: 178,355,538-178,363,563 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 3895 variant alleles and maps to 294 oligo probes.

Gene

This transcript is a product of gene ENSG00000038002.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264595.2	AGA-001	2107	346aa	ENSP00000264595.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3829	P20933 Q6LD43	NM_001171988.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502310.1	AGA-006	464	154aa	ENSP00000423798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9C7	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000510635.1	AGA-004	414	138aa	ENSP00000421471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000506853.1	AGA-003	762	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510955.1	AGA-002	880	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511231.1	AGA-005	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 762 bps,

Version

ENST00000506853.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361918 (version 1)

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Transcript: ENST00000506853.1 AGA-003

Summary