Transcript: ENST00000257848.7 METTL1-002

Description

methyltransferase like 1 [Source:HGNC Symbol;Acc:7030]

Gene Synonyms

C12orf1, TRM8, TRMT8, YDL201w

Location

Chromosome 12: 58,162,365-58,165,902 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 1809 variant alleles and maps to 340 oligo probes.

Gene

This transcript is a product of gene ENSG00000037897.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000324871.7	METTL1-001	2066	276aa	ENSP00000314441.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8955	F8VSD9 Q9UBP6	NM_005371.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000257848.7	METTL1-002	1096	155aa	ENSP00000257848.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8956	F8VSD9 Q9UBP6	NM_023033.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547653.1	METTL1-008	726	63aa	ENSP00000447838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000548504.1	METTL1-007	371	124aa	ENSP00000449397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000553125.1	METTL1-003	717	36aa	ENSP00000448342.1	Nonsense mediated decay		F8VSD9	-	-
ENST00000551117.1	METTL1-006	503	81aa	ENSP00000447988.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000548681.1	METTL1-004	611	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000549773.1	METTL1-005	629	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,096 bps, Translation length: 155 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBP6

CCDS

This transcript is a member of the Human CCDS set: CCDS8956

Version

ENST00000257848.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000316529 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000257848.7 METTL1-002

Summary