Transcript: ENST00000237264.4 TBPL1-001

Description

TBP-like 1 [Source:HGNC Symbol;Acc:11589]

Gene Synonyms

MGC:8389, MGC:9620, STUD, TLF, TLP, TLP21, TRF2, TRP

Location

Chromosome 6: 134,274,333-134,311,570 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 15362 variant alleles and maps to 401 oligo probes.

Gene

This transcript is a product of gene ENSG00000028839.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000237264.4	TBPL1-001	4228	186aa	ENSP00000237264.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5168	P62380 Q7Z6T9 Q7Z6U0 Q7Z6U1	NM_004865.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416965.1	TBPL1-003	991	128aa	ENSP00000402864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z6T9 Q7Z6U0 Q7Z6U1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457715.1	TBPL1-005	865	45aa	ENSP00000398186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z6T9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000367871.1	TBPL1-002	808	163aa	ENSP00000356845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z6T9 Q7Z6U0 Q7Z6U1 Q7Z6U2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367869.1	TBPL1-004	623	91aa	ENSP00000356843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z6T9 Q7Z6U0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477527.1	TBPL1-007	634	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481694.1	TBPL1-006	284	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 4,228 bps, Translation length: 186 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62380

CCDS

This transcript is a member of the Human CCDS set: CCDS5168

Version

ENST00000237264.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000042294 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000237264.4 TBPL1-001

Summary