Transcript: ENST00000528894.4 POU2F2-009

Description

POU class 2 homeobox 2 [Source:HGNC Symbol;Acc:9213]

Gene Synonyms

OCT2, OTF2, Oct-2

Location

Chromosome 19: 42,599,940-42,636,543 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 14707 variant alleles and maps to 277 oligo probes.

Gene

This transcript is a product of gene ENSG00000028277.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000526816.2	POU2F2-005	1928	479aa	ENSP00000431603.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56095	P09086 Q9UMI6 Q9UMJ4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389341.5	POU2F2-001	6900	463aa	ENSP00000373992.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33035	P09086 Q9UMI6 Q9UMJ4	NM_002698.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342301.4	POU2F2-201	4610	602aa	ENSP00000339369.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5ME60 Q9UMJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560804.2	POU2F2-015	2269	618aa	ENSP00000452930.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKT2 Q9UMJ4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533720.1	POU2F2-002	2053	586aa	ENSP00000437221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNC9 Q9UMJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560398.1	POU2F2-017	1788	485aa	ENSP00000453255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLL6 Q9UMI6 Q9UMJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529067.1	POU2F2-003	1776	400aa	ENSP00000437224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58665	P09086	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529952.1	POU2F2-004	1703	467aa	ENSP00000436988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56094	P09086 Q9UMJ4	NM_001207026.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560558.1	POU2F2-016	1605	424aa	ENSP00000454179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNW1 Q9UMI6 Q9UMJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528894.4	POU2F2-009	785	262aa	ENSP00000475664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000533548.1	POU2F2-014	693	198aa	ENSP00000453995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000598842.1	POU2F2-020	670	124aa	ENSP00000471890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526831.1	POU2F2-010	660	220aa	ENSP00000476062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000558596.3	POU2F2-019	195	65aa	ENSP00000476240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQU9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000534559.1	POU2F2-006	2003	117aa	ENSP00000436100.1	Nonsense mediated decay		E9PR37	-	-
ENST00000524801.2	POU2F2-011	622	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532176.2	POU2F2-012	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531773.1	POU2F2-007	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530982.3	POU2F2-013	700	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 785 bps, Translation length: 262 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000528894.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000416144 (version 3)

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Transcript: ENST00000528894.4 POU2F2-009

Summary