Transcript: ENST00000437165.1 AGPAT4-004

Description

1-acylglycerol-3-phosphate O-acyltransferase 4 [Source:HGNC Symbol;Acc:20885]

Gene Synonyms

1-AGPAT4, LPAAT-delta, dJ473J16.2

Location

Chromosome 6: 161,564,988-161,570,321 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 2180 variant alleles and maps to 103 oligo probes.

Gene

This transcript is a product of gene ENSG00000026652.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320285.4	AGPAT4-001	7865	378aa	ENSP00000314036.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5280	Q6PJN9 Q9NRZ5	NM_020133.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366911.5	AGPAT4-203	7705	118aa	ENSP00000355878.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6AI25	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366908.5	AGPAT4-202	1801	133aa	ENSP00000355875.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XAF1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457520.2	AGPAT4-204	1133	216aa	ENSP00000407007.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSF9 Q6PJN9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366905.3	AGPAT4-003	942	159aa	ENSP00000355872.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TEE8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366906.5	AGPAT4-201	933	124aa	ENSP00000355873.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DMU6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437165.1	AGPAT4-004	490	105aa	ENSP00000400211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000436279.1	AGPAT4-002	875	133aa	ENSP00000413901.1	Nonsense mediated decay		G3XAF1	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 490 bps, Translation length: 105 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000437165.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000042986 (version 1)

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Transcript: ENST00000437165.1 AGPAT4-004

Summary