Transcript: ENST00000555159.1 HSD17B6-002

Description

hydroxysteroid (17-beta) dehydrogenase 6 [Source:HGNC Symbol;Acc:23316]

Gene Synonyms

HSE, RODH, SDR9C6

Location

Chromosome 12: 57,145,945-57,181,520 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 15445 variant alleles and maps to 385 oligo probes.

Gene

This transcript is a product of gene ENSG00000025423.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000554643.1	HSD17B6-003	1751	317aa	ENSP00000451406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8925	G3V3Y9 G3V508 O14756	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555805.1	HSD17B6-004	1722	317aa	ENSP00000451753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8925	G3V3Y9 G3V508 O14756	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554150.1	HSD17B6-005	1547	317aa	ENSP00000452273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8925	G3V3Y9 G3V508 O14756	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555159.1	HSD17B6-002	1525	317aa	ENSP00000450698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8925	G3V3Y9 G3V508 O14756	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322165.1	HSD17B6-001	1512	317aa	ENSP00000318631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8925	G3V3Y9 G3V508 O14756	NM_003725.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554155.1	HSD17B6-007	592	88aa	ENSP00000451497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3Y9 G3V508	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556650.1	HSD17B6-006	591	75aa	ENSP00000452103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V508	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556481.1	HSD17B6-008	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556875.1	HSD17B6-009	412	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553476.1	HSD17B6-010	307	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,525 bps, Translation length: 317 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14756

CCDS

This transcript is a member of the Human CCDS set: CCDS8925

Version

ENST00000555159.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000410680 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000555159.1 HSD17B6-002

Summary