Transcript: ENST00000468587.1 ATP1A2-006

Description

ATPase, Na+/K+ transporting, alpha 2 polypeptide [Source:HGNC Symbol;Acc:800]

Gene Synonyms

FHM2, KIAA0778, MHP2

Location

Chromosome 1: 160,093,748-160,095,332 forward strand.

About this transcript

This transcript has 3 exons, is associated with 789 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSG00000018625.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361216.3	ATP1A2-001	5421	1020aa	ENSP00000354490.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1196	P50993 Q58I22	NM_000702.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447527.1	ATP1A2-008	4413	714aa	ENSP00000411705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000392233.3	ATP1A2-003	3338	1009aa	ENSP00000376066.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKY9 Q58I22	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000459972.1	ATP1A2-004	634	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472488.1	ATP1A2-002	3114	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468587.1	ATP1A2-006	641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478587.1	ATP1A2-007	481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463989.1	ATP1A2-005	444	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 641 bps,

Version

ENST00000468587.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000077393 (version 1)

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Transcript: ENST00000468587.1 ATP1A2-006

Summary