Transcript: ENST00000465804.1 WWTR1-001

Description

WW domain containing transcription regulator 1 [Source:HGNC Symbol;Acc:24042]

Gene Synonyms

DKFZp586I1419, TAZ

Location

Chromosome 3: 149,235,022-149,421,060 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 78317 variant alleles and maps to 542 oligo probes.

Gene

This transcript is a product of gene ENSG00000018408.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000465804.1	WWTR1-001	5030	400aa	ENSP00000419465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3144	C9J038 C9J588 C9JQS8 C9JR84 Q9GZV5	NM_001168278.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360632.3	WWTR1-004	2103	400aa	ENSP00000353847.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3144	C9J038 C9J588 C9JQS8 C9JR84 Q9GZV5	NM_015472.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467467.1	WWTR1-003	1603	400aa	ENSP00000419234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3144	C9J038 C9J588 C9JQS8 C9JR84 Q9GZV5	NM_001168280.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472417.1	WWTR1-010	955	247aa	ENSP00000417339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J337	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000479238.1	WWTR1-009	697	189aa	ENSP00000418580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J038 C9J588 C9JQS8 C9JR84	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000460517.1	WWTR1-007	604	21aa	ENSP00000417984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J588	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475579.1	WWTR1-006	578	109aa	ENSP00000420159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J588 C9JQS8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485352.1	WWTR1-008	503	138aa	ENSP00000420120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J588 C9JQS8 C9JR84	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471586.1	WWTR1-012	584	42aa	ENSP00000418621.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000494754.1	WWTR1-013	566	29aa	ENSP00000417862.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000474080.1	WWTR1-002	2143	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485244.1	WWTR1-011	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 5,030 bps, Translation length: 400 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9GZV5

CCDS

This transcript is a member of the Human CCDS set: CCDS3144

Version

ENST00000465804.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs112399999, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) ESP6500:African_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000356498 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000465804.1 WWTR1-001

Summary