Transcript: ENST00000423141.1 NPC1L1-002

Description

NPC1-like 1 [Source:HGNC Symbol;Acc:7898]

Gene Synonyms

NPC11L1

Location

Chromosome 7: 44,572,826-44,580,914 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 4262 variant alleles and maps to 278 oligo probes.

Gene

This transcript is a product of gene ENSG00000015520.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000289547.4	NPC1L1-001	5048	1359aa	ENSP00000289547.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5491	Q9UHC9	NM_013389.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381160.3	NPC1L1-003	4141	1332aa	ENSP00000370552.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43575	Q9UHC9	NM_001101648.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546276.1	NPC1L1-201	4001	1286aa	ENSP00000438033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZLE6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423141.1	NPC1L1-002	2554	724aa	ENSP00000404670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UHC9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,554 bps, Translation length: 724 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHC9

Version

ENST00000423141.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000339389 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000423141.1 NPC1L1-002

Summary