Transcript: ENST00000549569.1 POLR3B-004

Description

polymerase (RNA) III (DNA directed) polypeptide B [Source:HGNC Symbol;Acc:30348]

Gene Synonyms

C128, FLJ10388, HLD8, RPC2

Location

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 18977 variant alleles and maps to 68 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000228347.4	POLR3B-001	4273	1133aa	ENSP00000228347.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9105	B3KRQ8 F8VRU2 Q9NW08	NM_018082.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539066.1	POLR3B-003	4118	1075aa	ENSP00000445721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53824	B3KRQ8 F8VRU2 Q9NW08	NM_001160708.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549569.1	POLR3B-004	580	169aa	ENSP00000448398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRU2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549195.1	POLR3B-005	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 580 bps, Translation length: 169 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000549569.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407169 (version 1)