Transcript: ENST00000228347.4 POLR3B-001

Description

polymerase (RNA) III (DNA directed) polypeptide B [Source:HGNC Symbol;Acc:30348]

Gene Synonyms

C128, FLJ10388, HLD8, RPC2

Location

About this transcript

This transcript has 28 exons, is annotated with 18 domains and features, is associated with 63054 variant alleles and maps to 762 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000228347.4	POLR3B-001	4273	1133aa	ENSP00000228347.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9105	B3KRQ8 F8VRU2 Q9NW08	NM_018082.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539066.1	POLR3B-003	4118	1075aa	ENSP00000445721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53824	B3KRQ8 F8VRU2 Q9NW08	NM_001160708.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549569.1	POLR3B-004	580	169aa	ENSP00000448398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRU2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549195.1	POLR3B-005	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 4,273 bps, Translation length: 1,133 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NW08

CCDS

This transcript is a member of the Human CCDS set: CCDS9105

Version

ENST00000228347.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000407166 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.