Transcript: ENST00000471373.1 CLDN11-007

Description

claudin 11 [Source:HGNC Symbol;Acc:8514]

Gene Synonyms

OSP, OTM

Location

Chromosome 3: 170,139,033-170,220,798 forward strand.

About this transcript

This transcript has 4 exons, is associated with 33912 variant alleles and maps to 99 oligo probes.

Gene

This transcript is a product of gene ENSG00000013297.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000064724.3	CLDN11-001	2169	207aa	ENSP00000064724.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3213	O75508	NM_005602.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486975.1	CLDN11-002	1139	165aa	ENSP00000417434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451576.1	CLDN11-201	498	165aa	ENSP00000410185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489485.1	CLDN11-004	1854	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480067.1	CLDN11-010	1589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477531.3	CLDN11-008	1065	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488989.1	CLDN11-009	600	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468358.1	CLDN11-006	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471373.1	CLDN11-007	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486429.1	CLDN11-005	998	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 571 bps,

Version

ENST00000471373.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352592 (version 2)

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Transcript: ENST00000471373.1 CLDN11-007

Summary