Transcript: ENST00000588439.1 TYROBP-004

Description

TYRO protein tyrosine kinase binding protein [Source:HGNC Symbol;Acc:12449]

Gene Synonyms

DAP12, KARAP, PLO-SL, PLOSL

Location

Chromosome 19: 36,395,363-36,399,125 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1910 variant alleles and maps to 314 oligo probes.

Gene

This transcript is a product of gene ENSG00000011600.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262629.4	TYROBP-001	568	113aa	ENSP00000262629.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12482	O43914	NM_198125.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585901.2	TYROBP-006	620	144aa	ENSP00000468608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ES93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424586.3	TYROBP-008	541	101aa	ENSP00000402371.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59378	-	NM_001173515.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544690.2	TYROBP-010	522	102aa	ENSP00000445332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54255	O43914	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589517.1	TYROBP-002	415	112aa	ENSP00000468447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46058	O43914	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587837.1	TYROBP-009	570	35aa	ENSP00000465081.1	Nonsense mediated decay		K7EKK0	-	-
ENST00000586946.1	TYROBP-007	522	35aa	ENSP00000465656.1	Nonsense mediated decay		K7EKK0	-	-
ENST00000588439.1	TYROBP-004	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585626.1	TYROBP-003	448	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 594 bps,

Version

ENST00000588439.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457399 (version 1)

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Transcript: ENST00000588439.1 TYROBP-004

Summary