Transcript: ENST00000586898.1 MBTD1-004

Description

mbt domain containing 1 [Source:HGNC Symbol;Acc:19866]

Gene Synonyms

FLJ20055, SA49P01

Location

Chromosome 17: 49,269,467-49,270,377 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 7 domains and features, is associated with 333 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSG00000011258.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000586178.1	MBTD1-001	5382	628aa	ENSP00000468304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11581	Q05BQ5	NM_017643.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415868.1	MBTD1-202	5099	628aa	ENSP00000403946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11581	Q05BQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376381.2	MBTD1-201	1885	430aa	ENSP00000365561.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q05BQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405860.3	MBTD1-003	3224	169aa	ENSP00000386072.3	Nonsense mediated decay		Q05BQ5	-	-
ENST00000586898.1	MBTD1-004	534	89aa	ENSP00000467622.1	Nonsense mediated decay		K7EQ11	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593259.1	MBTD1-005	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591270.1	MBTD1-002	2163	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 534 bps, Translation length: 89 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000586898.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318128 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000586898.1 MBTD1-004

Summary