Transcript: ENST00000346436.6 CLCN6-001

Description

chloride channel, voltage-sensitive 6 [Source:HGNC Symbol;Acc:2024]

Gene Synonyms

CLC-6, KIAA0046

Location

Chromosome 1: 11,866,268-11,903,201 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 41 domains and features, is associated with 18043 variant alleles and maps to 1010 oligo probes.

Gene

This transcript is a product of gene ENSG00000011021.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000346436.6	CLCN6-001	5583	869aa	ENSP00000234488.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS138	P51797	NM_001286.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000312413.6	CLCN6-201	5477	353aa	ENSP00000308367.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P51797	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376487.3	CLCN6-202	3014	847aa	ENSP00000365670.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57972	P51797	NM_001256959.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376496.3	CLCN6-005	2922	953aa	ENSP00000365679.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P51797	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376497.3	CLCN6-006	814	122aa	ENSP00000365680.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SNW4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376492.3	CLCN6-003	1062	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000376490.3	CLCN6-002	963	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000376491.3	CLCN6-004	927	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494028.1	CLCN6-007	773	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 5,583 bps, Translation length: 869 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51797

CCDS

This transcript is a member of the Human CCDS set: CCDS138

Version

ENST00000346436.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000006639 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000346436.6 CLCN6-001

Summary