Transcript: ENST00000478541.1 CYTH3-005

Description

cytohesin 3 [Source:HGNC Symbol;Acc:9504]

Gene Synonyms

ARNO3, GRP1, PSCD3

Location

Chromosome 7: 6,210,641-6,217,572 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 4118 variant alleles and maps to 270 oligo probes.

Gene

This transcript is a product of gene ENSG00000008256.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000350796.3	CYTH3-001	4505	399aa	ENSP00000297044.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5346	O43739 Q96HS5	NM_004227.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396741.2	CYTH3-201	1171	314aa	ENSP00000379967.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z2V9 Q96HS5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488964.1	CYTH3-008	606	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491641.1	CYTH3-007	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465320.1	CYTH3-003	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461891.1	CYTH3-010	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482460.1	CYTH3-002	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466543.1	CYTH3-009	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495176.1	CYTH3-004	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481329.1	CYTH3-006	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478541.1	CYTH3-005	505	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 505 bps,

Version

ENST00000478541.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000317054 (version 1)

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Transcript: ENST00000478541.1 CYTH3-005

Summary