Transcript: ENST00000333360.7 SELE-001

Description

selectin E [Source:HGNC Symbol;Acc:10718]

Gene Synonyms

CD62E, ELAM, ELAM1, ESEL, LECAM2

Location

Chromosome 1: 169,691,782-169,703,203 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 51 domains and features, is associated with 5419 variant alleles and maps to 502 oligo probes.

Gene

This transcript is a product of gene ENSG00000007908.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000333360.7	SELE-001	3857	610aa	ENSP00000331736.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1283	P16581	NM_000450.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367781.4	SELE-203	3686	547aa	ENSP00000356755.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TI73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367782.4	SELE-204	3686	547aa	ENSP00000356756.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TI74	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367777.1	SELE-002	3576	547aa	ENSP00000356751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TI74	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367776.1	SELE-005	3576	547aa	ENSP00000356750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TI73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367780.4	SELE-202	3500	485aa	ENSP00000356754.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TI75	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367779.4	SELE-201	3497	484aa	ENSP00000356753.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TI72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367775.1	SELE-003	3389	485aa	ENSP00000356749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TI75	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367774.1	SELE-004	1518	484aa	ENSP00000356748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TI72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609271.1	SELE-007	560	12aa	ENSP00000476784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461085.1	SELE-006	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 3,857 bps, Translation length: 610 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P16581

CCDS

This transcript is a member of the Human CCDS set: CCDS1283

Version

ENST00000333360.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000084333 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000333360.7 SELE-001

Summary