Transcript: ENST00000587818.1 TRAPPC6A-005

Description

trafficking protein particle complex 6A [Source:HGNC Symbol;Acc:23069]

Gene Synonyms

HSPC289, MGC2650, TRS33

Location

Chromosome 19: 45,667,983-45,681,469 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 6380 variant alleles and maps to 240 oligo probes.

Gene

This transcript is a product of gene ENSG00000007255.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000006275.4	TRAPPC6A-002	805	173aa	ENSP00000006275.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12655	O75865	NM_024108.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585934.1	TRAPPC6A-001	758	159aa	ENSP00000468612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59397	B7TZ90 O75865	NM_001270891.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588062.1	TRAPPC6A-003	695	113aa	ENSP00000468363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59396	O75865	NM_001270893.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592647.1	TRAPPC6A-004	514	127aa	ENSP00000468182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59395	O75865	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587818.1	TRAPPC6A-005	433	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 433 bps,

Version

ENST00000587818.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457558 (version 1)

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Transcript: ENST00000587818.1 TRAPPC6A-005

Summary