Transcript: ENST00000381042.4 PNPLA4-003

Description

patatin-like phospholipase domain containing 4 [Source:HGNC Symbol;Acc:24887]

Gene Synonyms

DXS1283E, GS2, iPLA2eta

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 8468 variant alleles and maps to 469 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381042.4	PNPLA4-003	3372	253aa	ENSP00000370430.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14129	C9IZF6 P41247	NM_004650.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444736.1	PNPLA4-201	2752	253aa	ENSP00000415245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14129	C9IZF6 P41247	NM_001142389.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537427.1	PNPLA4-202	2559	166aa	ENSP00000443157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55368	P41247	NM_001172672.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442940.1	PNPLA4-002	652	190aa	ENSP00000406698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZF6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,372 bps, Translation length: 253 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41247

CCDS

This transcript is a member of the Human CCDS set: CCDS14129

Version

ENST00000381042.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055687 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.