Transcript: ENST00000563383.1 CX3CL1-002

Description

chemokine (C-X3-C motif) ligand 1 [Source:HGNC Symbol;Acc:10647]

Gene Synonyms

ABCD-3, C3Xkine, CXC3, CXC3C, FKN, NTN, NTT, SCYD1, fractalkine, neurotactin

Location

About this transcript

This transcript has 3 exons, is annotated with 21 domains and features, is associated with 5779 variant alleles and maps to 357 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000006053.6	CX3CL1-001	3321	397aa	ENSP00000006053.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10779	A0N0N7 J3QRA1 P78423	NM_002996.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565912.1	CX3CL1-003	5796	359aa	ENSP00000464114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRA1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563383.1	CX3CL1-002	3313	403aa	ENSP00000456830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSR6 J3QRA1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564948.1	CX3CL1-004	563	55aa	ENSP00000457996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BV86	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 3,313 bps, Translation length: 403 residues

Version

ENST00000563383.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000430432 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.