Transcript: ENST00000222381.3 PON1-001

Description

paraoxonase 1 [Source:HGNC Symbol;Acc:9204]

Gene Synonyms

ESA, MVCD5, PON

Location

About this transcript

This transcript has 9 exons, is annotated with 17 domains and features, is associated with 11759 variant alleles and maps to 537 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000222381.3	PON1-001	2568	355aa	ENSP00000222381.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5638	P27169	NM_000446.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542556.1	PON1-201	1112	355aa	ENSP00000444854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4W9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433729.1	PON1-003	1058	77aa	ENSP00000407359.1	Nonsense mediated decay		F8WF42	-	-
ENST00000470502.1	PON1-006	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462594.1	PON1-004	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,568 bps, Translation length: 355 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P27169

CCDS

This transcript is a member of the Human CCDS set: CCDS5638

Version

ENST00000222381.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000332865 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.