Transcript: ENST00000158166.5 CAMKK1-002

Description

calcium/calmodulin-dependent protein kinase kinase 1, alpha [Source:HGNC Symbol;Acc:1469]

Gene Synonyms

CAMKKA, DKFZp761M0423, MGC34095

Location

Chromosome 17: 3,768,451-3,796,338 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 13 domains and features, is associated with 14956 variant alleles and maps to 389 oligo probes.

Gene

This transcript is a product of gene ENSG00000004660.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000158166.5	CAMKK1-002	2459	520aa	ENSP00000158166.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11039	Q8N5S9	NM_172207.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381771.2	CAMKK1-201	3660	543aa	ENSP00000371190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W9H1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348335.2	CAMKK1-003	3563	505aa	ENSP00000323118.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11038	Q8N5S9	NM_032294.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381769.2	CAMKK1-001	3508	532aa	ENSP00000371188.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KPJ3	NM_172206.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573483.1	CAMKK1-004	3898	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,459 bps, Translation length: 520 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N5S9

CCDS

This transcript is a member of the Human CCDS set: CCDS11039

Version

ENST00000158166.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207455 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000158166.5 CAMKK1-002

Summary