Transcript: ENST00000519590.1 MTMR7-003

Description

myotubularin related protein 7 [Source:HGNC Symbol;Acc:7454]

Location

Chromosome 8: 17,159,711-17,169,182 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 5816 variant alleles and maps to 233 oligo probes.

Gene

This transcript is a product of gene ENSG00000003987.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000180173.5	MTMR7-001	3850	660aa	ENSP00000180173.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34851	B4E1B6 B4E1E5 I0EZ69 Q9Y216	NM_004686.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521857.1	MTMR7-002	2158	555aa	ENSP00000429733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y216	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398099.3	MTMR7-201	1455	251aa	ENSP00000381171.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E1E5 I0EZ69	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517317.1	MTMR7-006	739	105aa	ENSP00000431000.1	Nonsense mediated decay		E5RK11	-	-
ENST00000523571.1	MTMR7-004	719	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519122.1	MTMR7-008	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519763.1	MTMR7-009	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518272.1	MTMR7-005	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519590.1	MTMR7-003	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521177.1	MTMR7-007	506	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 584 bps,

Version

ENST00000519590.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375313 (version 1)

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Transcript: ENST00000519590.1 MTMR7-003

Summary