Gene: TRNT1 ENSG00000072756

Description

tRNA nucleotidyl transferase, CCA-adding, 1 [Source:HGNC Symbol;Acc:17341]

Gene Synonyms

CCA1, CGI-47, MtCCA

Location

Chromosome 3: 3,168,600-3,192,563 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 11 transcripts (splice variants), 203 orthologues and is associated with 3 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251607.6	TRNT1-001	2276	434aa	ENSP00000251607.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2561	C9JRS7 Q96Q11	NM_182916.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000280591.6	TRNT1-004	2180	414aa	ENSP00000280591.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRS7 Q96Q11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000402675.1	TRNT1-002	1935	57aa	ENSP00000385745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96Q11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000339437.6	TRNT1-003	976	57aa	ENSP00000342985.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96Q11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000420393.1	TRNT1-007	854	57aa	ENSP00000400394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96Q11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000413000.1	TRNT1-008	483	62aa	ENSP00000388615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRS7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000434583.1	TRNT1-010	1871	434aa	ENSP00000415100.1	Nonsense mediated decay	CCDS2561	C9JRS7 Q96Q11	-	-
ENST00000397779.2	TRNT1-011	374	65aa	ENSP00000380881.2	Nonsense mediated decay		F8W8C3	-	-
ENST00000469632.1	TRNT1-009	867	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465998.1	TRNT1-006	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482311.1	TRNT1-012	447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Variant image

Retirement notice

Human only - retirement of this view

As of Ensembl release 93 this view will no longer be available for human, because we feel that the density of known human genetic variation is too great for the display to be informative in its current form.

Other species will not be affected, as they have less variation data.

For more information about the decision and on how to find variation data for a gene, please see our blog post.

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Gene: TRNT1 ENSG00000072756

Variant image

Retirement notice

Human only - retirement of this view