Description
LIM and cysteine-rich domains 1 [Source:HGNC Symbol;Acc:6633]
Location
Chromosome 3: 8,543,393-8,609,805 forward strand.
GRCh37:CM000665.1
About this gene
This gene has 8 transcripts (splice variants), 202 orthologues and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000157600.3 | LMCD1-001 | 1851 | 365aa | ENSP00000157600.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33688 | B4DG80 Q9NZU5 | NM_014583.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000426878.1 | LMCD1-006 | 1170 | 204aa | ENSP00000411222.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C3D2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000454244.1 | LMCD1-002 | 1113 | 292aa | ENSP00000396515.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS63534 | B4DG80 | NM_001278233.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397386.3 | LMCD1-201 | 1061 | 253aa | ENSP00000380542.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS63533 | B4DEY6 | NM_001278234.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000415597.1 | LMCD1-004 | 870 | 233aa | ENSP00000400555.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYS1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535732.1 | LMCD1-202 | 858 | 247aa | ENSP00000441100.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS63532 | F5GX84 H7C3D2 | NM_001278235.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000456506.1 | LMCD1-003 | 1059 | 58aa | ENSP00000405049.1 | Nonsense mediated decay | F8WB09 | - | - | |
| ENST00000470776.1 | LMCD1-005 | 579 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |