Description
tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:20286]
Gene Synonyms
FLJ20061, IPT, MOD5
Location
Chromosome 1: 40,306,723-40,349,183 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 18 transcripts (splice variants), 216 orthologues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000316891.5 | TRIT1-001 | 2112 | 467aa | ENSP00000321810.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS30681 | Q3T7B4 Q3T7B8 Q3T7C7 Q9H3H1 | NM_017646.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000372818.1 | TRIT1-002 | 2034 | 441aa | ENSP00000361905.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3T7B4 Q9H3H1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000441669.2 | TRIT1-003 | 1851 | 385aa | ENSP00000388333.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3T7B4 Q3T7B8 Q5QPK7 Q9H3H1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000545233.1 | TRIT1-205 | 987 | 221aa | ENSP00000439596.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3T7B4 Q3T7B8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000537440.1 | TRIT1-202 | 874 | 163aa | ENSP00000437700.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3T7B4 Q3T7B5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544981.1 | TRIT1-204 | 847 | 144aa | ENSP00000442765.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E3K2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000537223.1 | TRIT1-201 | 735 | 163aa | ENSP00000440865.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3T7B4 Q3T7B5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000541099.1 | TRIT1-203 | 545 | 85aa | ENSP00000437896.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3T7B4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000462797.1 | TRIT1-004 | 2000 | 349aa | ENSP00000473773.1 | Nonsense mediated decay | S4R2Z0 | - | - | |
| ENST00000495175.2 | TRIT1-005 | 1156 | 63aa | ENSP00000474264.1 | Nonsense mediated decay | S4R3F4 | - | - | |
| ENST00000492612.2 | TRIT1-009 | 983 | 140aa | ENSP00000473708.1 | Nonsense mediated decay | Q3T7C3 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000489945.1 | TRIT1-006 | 861 | 143aa | ENSP00000473745.1 | Nonsense mediated decay | B4DK89 Q3T7C3 | - | - | |
| ENST00000486825.2 | TRIT1-007 | 850 | 81aa | ENSP00000474151.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000469476.2 | TRIT1-008 | 773 | 170aa | ENSP00000474768.1 | Nonsense mediated decay | S4R3U8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000491865.1 | TRIT1-013 | 738 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000465417.1 | TRIT1-012 | 499 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000462243.2 | TRIT1-010 | 550 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467774.1 | TRIT1-011 | 464 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |