Description
stimulated by retinoic acid 6 [Source:HGNC Symbol;Acc:30650]
Gene Synonyms
FLJ12541, MCOPCB8, MCOPS9
Location
Chromosome 15: 74,471,807-74,504,608 reverse strand.
GRCh37:CM000677.1
About this gene
This gene has 21 transcripts (splice variants) and is associated with 6 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000563965.1 | STRA6-005 | 2565 | 706aa | ENSP00000456609.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55973 | B7Z5G7 I3L0M6 Q9BX79 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000323940.5 | STRA6-002 | 2864 | 667aa | ENSP00000326085.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10261 | I3L0M6 Q9BX79 | NM_001142619.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000395105.4 | STRA6-001 | 2800 | 667aa | ENSP00000378537.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10261 | I3L0M6 Q9BX79 | NM_022369.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000423167.2 | STRA6-007 | 2776 | 658aa | ENSP00000413012.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45301 | I3L0M6 Q9BX79 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000416286.3 | STRA6-009 | 2750 | 659aa | ENSP00000400403.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L0M6 J3KQI6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000449139.2 | STRA6-010 | 2732 | 667aa | ENSP00000410221.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10261 | I3L0M6 Q9BX79 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000535552.1 | STRA6-008 | 2631 | 704aa | ENSP00000440238.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55974 | I3L0M6 Q9BX79 | NM_001199040.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000574278.1 | STRA6-011 | 2455 | 682aa | ENSP00000458827.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58387 | I3L0M6 Q9BX79 | NM_001199041.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000432245.2 | STRA6-003 | 1889 | 159aa | ENSP00000407176.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45302 | I3L0M6 Q9BX79 | NM_001142620.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000572785.1 | STRA6-019 | 797 | 266aa | ENSP00000459546.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000571341.1 | STRA6-015 | 449 | 88aa | ENSP00000458204.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L0M6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000569936.1 | STRA6-004 | 2151 | 477aa | ENSP00000461799.1 | Nonsense mediated decay | I3L0M6 I3NI08 | - | - | |
| ENST00000573391.1 | STRA6-013 | 566 | 87aa | ENSP00000458734.1 | Nonsense mediated decay | I3L1C7 | - | - | |
| ENST00000574439.1 | STRA6-012 | 2887 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000573456.1 | STRA6-016 | 760 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000574570.1 | STRA6-014 | 569 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000545137.1 | STRA6-006 | 2324 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000572975.1 | STRA6-017 | 795 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000573724.1 | STRA6-021 | 596 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000573214.1 | STRA6-020 | 577 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000575272.1 | STRA6-018 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
