Description
solute carrier family 12 (potassium/chloride transporter), member 6 [Source:HGNC Symbol;Acc:10914]
Gene Synonyms
ACCPN, KCC3, KCC3A, KCC3B
Location
Chromosome 15: 34,525,460-34,630,261 reverse strand.
GRCh37:CM000677.1
About this gene
This gene has 21 transcripts (splice variants), 8 paralogues and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000354181.3 | SLC12A6-003 | 4568 | 1150aa | ENSP00000346112.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58352 | H0YKE6 H0YKJ2 H0YKL8 H0YNJ5 Q9UHW9 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000458406.2 | SLC12A6-006 | 4425 | 1091aa | ENSP00000387725.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42012 | H0YKL8 H0YNJ5 Q9UHW9 | NM_001042494.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000560611.1 | SLC12A6-010 | 4239 | 1150aa | ENSP00000454168.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58352 | H0YKE6 H0YKJ2 H0YKL8 H0YNJ5 Q9UHW9 | NM_133647.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397707.2 | SLC12A6-002 | 4194 | 1135aa | ENSP00000380819.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42010 | H0YNJ5 Q9UHW9 | NM_001042497.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397702.2 | SLC12A6-008 | 4096 | 1091aa | ENSP00000380814.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42012 | H0YKL8 H0YNJ5 Q9UHW9 | NM_001042495.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000558589.1 | SLC12A6-004 | 3866 | 1141aa | ENSP00000452776.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42011 | H0YKE6 H0YKL8 H0YNJ5 Q9UHW9 | NM_001042496.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000290209.5 | SLC12A6-001 | 3817 | 1099aa | ENSP00000290209.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10036 | H0YNJ5 Q9UHW9 | NM_005135.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000560164.1 | SLC12A6-017 | 3744 | 962aa | ENSP00000452705.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KXX3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000558667.1 | SLC12A6-009 | 3725 | 1150aa | ENSP00000453473.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58352 | H0YKE6 H0YKJ2 H0YKL8 H0YNJ5 Q9UHW9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000451844.2 | SLC12A6-201 | 3660 | 962aa | ENSP00000390199.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KXX3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000559236.1 | SLC12A6-011 | 576 | 135aa | ENSP00000452828.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YKJ2 H0YKL8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000561120.1 | SLC12A6-012 | 567 | 152aa | ENSP00000452771.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YKE6 H0YKL8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000559484.1 | SLC12A6-013 | 548 | 60aa | ENSP00000452857.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YKL8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000560332.1 | SLC12A6-018 | 490 | 107aa | ENSP00000454037.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNJ5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000561080.1 | SLC12A6-020 | 5407 | 906aa | ENSP00000454069.1 | Nonsense mediated decay | H0YKE6 H0YKJ2 H0YKL8 H0YMQ9 H0YNJ5 | - | - | |
| ENST00000559664.1 | SLC12A6-007 | 5111 | 906aa | ENSP00000453702.1 | Nonsense mediated decay | H0YKE6 H0YKJ2 H0YKL8 H0YMQ9 H0YNJ5 | - | - | |
| ENST00000559523.1 | SLC12A6-005 | 4454 | 942aa | ENSP00000452904.1 | Nonsense mediated decay | H0YKL8 H0YKQ8 H0YNJ5 | - | - | |
| ENST00000558950.1 | SLC12A6-015 | 750 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000559076.1 | SLC12A6-016 | 632 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000560023.1 | SLC12A6-014 | 550 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000559441.1 | SLC12A6-019 | 549 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
