Gene: UBAP1 ENSG00000165006

Description

ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:12461]

Gene Synonyms

NAG20, UAP, UBAP, UBAP-1

Location

Chromosome 9: 34,179,003-34,252,521 forward strand.

GRCh37:CM000671.1

About this gene

This gene has 7 transcripts (splice variants), 1 paralogue and is associated with 2 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000545103.1	UBAP1-204	2702	566aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55303	Q9NZ09	NM_001171201.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536252.1	UBAP1-201	2898	502aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6550	Q9NZ09	NM_001171203.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000540348.1	UBAP1-202	2866	502aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6550	Q9NZ09	NM_001171204.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000297661.4	UBAP1-001	2735	502aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6550	Q9NZ09	NM_016525.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000543944.1	UBAP1-203	2618	538aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55302	Q9NZ09	NM_001171202.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000359544.2	UBAP1-002	2535	502aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6550	Q9NZ09	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000379186.4	UBAP1-003	2524	441aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NZ09	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Name

UBAP1 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q9NZ09

CCDS

This gene is a member of the Human CCDS set: CCDS55302.1, CCDS55303.1, CCDS6550.1

Ensembl version

ENSG00000165006.9

Other assemblies

This gene maps to 34,179,005-34,252,523 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000000430 (version 2)

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Gene: UBAP1 ENSG00000165006

Summary