Description
trafficking protein particle complex 4 [Source:HGNC Symbol;Acc:19943]
Gene Synonyms
HSPC172, PTD009, SBDN, SYNBINDIN, TRS23
Location
Chromosome 11: 118,889,142-118,896,164 forward strand.
GRCh37:CM000673.1
View alleles of this gene on alternative sequences
About this gene
This gene has 14 transcripts (splice variants), 1 gene allele and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000533632.1 | TRAPPC4-001 | 1759 | 219aa | ENSP00000436005.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8407 | G3V1A0 Q9Y296 | NM_016146.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000533058.1 | TRAPPC4-004 | 1209 | 257aa | ENSP00000432920.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PN70 G3V1A0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000359005.4 | TRAPPC4-005 | 849 | 181aa | ENSP00000351896.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V1A0 J3KP27 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000434101.2 | TRAPPC4-002 | 794 | 165aa | ENSP00000405033.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DME1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000525303.1 | TRAPPC4-010 | 654 | 126aa | ENSP00000435339.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKS9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000528230.1 | TRAPPC4-009 | 583 | 176aa | ENSP00000436827.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PQE8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000533012.1 | TRAPPC4-006 | 817 | 126aa | ENSP00000436281.1 | Nonsense mediated decay | G3V1A0 G5EA23 | - | - | |
| ENST00000525079.1 | TRAPPC4-011 | 768 | 117aa | ENSP00000433658.1 | Nonsense mediated decay | G3V1A0 | - | - | |
| ENST00000526141.1 | TRAPPC4-014 | 392 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000524797.1 | TRAPPC4-013 | 1924 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000533149.1 | TRAPPC4-012 | 1340 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531290.1 | TRAPPC4-007 | 1135 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000447216.2 | TRAPPC4-003 | 980 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000527680.1 | TRAPPC4-008 | 569 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
