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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HDAC2 ENSG00000196591

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Description

histone deacetylase 2 [Source:HGNC Symbol;Acc:4853]

Gene Synonyms

HD2, RPD3, YAF1

Location

Chromosome 6: 114,254,192-114,332,472 reverse strand.

GRCh37:CM000668.1

About this gene

This gene has 18 transcripts (splice variants) and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000519065.1	HDAC2-001	9874	488aa	ENSP00000430432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43493	B3KRS5 E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 Q92769	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398283.2	HDAC2-201	6656	582aa	ENSP00000381331.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KRS5 E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 J3KPW7	NM_001527.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368632.2	HDAC2-003	2084	458aa	ENSP00000357621.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KRS5 E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519108.1	HDAC2-004	2000	458aa	ENSP00000430008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KRS5 E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521610.1	HDAC2-008	580	100aa	ENSP00000429901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFI6 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524334.1	HDAC2-009	570	52aa	ENSP00000428989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518690.1	HDAC2-006	564	71aa	ENSP00000428653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFI6 E5RGV4 E5RJ04 E5RK19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521163.1	HDAC2-015	557	109aa	ENSP00000428024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFI6 E5RFP9 E5RGV4 E5RJ04 E5RK19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523240.1	HDAC2-007	557	65aa	ENSP00000429236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFI6 E5RJ04 E5RK19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425835.2	HDAC2-002	553	161aa	ENSP00000417026.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 H3BM24	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520895.1	HDAC2-010	551	60aa	ENSP00000428861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFI6 E5RK19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523628.1	HDAC2-011	549	103aa	ENSP00000427861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522371.1	HDAC2-012	502	86aa	ENSP00000428599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFI6 E5RGV4 E5RHE7 E5RJ04 E5RK19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523334.1	HDAC2-005	4810	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518756.1	HDAC2-016	826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521233.1	HDAC2-014	733	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520170.1	HDAC2-013	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520746.1	HDAC2-017	497	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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