Description
histone deacetylase 2 [Source:HGNC Symbol;Acc:4853]
Gene Synonyms
HD2, RPD3, YAF1
Location
Chromosome 6: 114,254,192-114,332,472 reverse strand.
GRCh37:CM000668.1
About this gene
This gene has 18 transcripts (splice variants) and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000519065.1 | HDAC2-001 | 9874 | 488aa | ENSP00000430432.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43493 | B3KRS5 E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 Q92769 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000398283.2 | HDAC2-201 | 6656 | 582aa | ENSP00000381331.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KRS5 E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 J3KPW7 | NM_001527.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000368632.2 | HDAC2-003 | 2084 | 458aa | ENSP00000357621.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KRS5 E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000519108.1 | HDAC2-004 | 2000 | 458aa | ENSP00000430008.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KRS5 E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000521610.1 | HDAC2-008 | 580 | 100aa | ENSP00000429901.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFI6 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000524334.1 | HDAC2-009 | 570 | 52aa | ENSP00000428989.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RK19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000518690.1 | HDAC2-006 | 564 | 71aa | ENSP00000428653.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFI6 E5RGV4 E5RJ04 E5RK19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521163.1 | HDAC2-015 | 557 | 109aa | ENSP00000428024.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFI6 E5RFP9 E5RGV4 E5RJ04 E5RK19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000523240.1 | HDAC2-007 | 557 | 65aa | ENSP00000429236.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFI6 E5RJ04 E5RK19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000425835.2 | HDAC2-002 | 553 | 161aa | ENSP00000417026.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 H3BM24 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000520895.1 | HDAC2-010 | 551 | 60aa | ENSP00000428861.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFI6 E5RK19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000523628.1 | HDAC2-011 | 549 | 103aa | ENSP00000427861.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFI6 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000522371.1 | HDAC2-012 | 502 | 86aa | ENSP00000428599.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFI6 E5RGV4 E5RHE7 E5RJ04 E5RK19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000523334.1 | HDAC2-005 | 4810 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000518756.1 | HDAC2-016 | 826 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000521233.1 | HDAC2-014 | 733 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000520170.1 | HDAC2-013 | 690 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000520746.1 | HDAC2-017 | 497 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
