Description
histidyl-tRNA synthetase [Source:HGNC Symbol;Acc:4816]
Gene Synonyms
HRS, USH3B
Location
Chromosome 5: 140,052,758-140,071,609 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 14 transcripts (splice variants), 1 paralogue and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000504156.1 | HARS-001 | 3334 | 509aa | ENSP00000425634.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4237 | B3KWE1 D6RF05 P12081 | NM_002109.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000504366.1 | HARS-003 | 3494 | 440aa | ENSP00000430063.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KWE1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000457527.2 | HARS-009 | 1896 | 489aa | ENSP00000387893.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58978 | D6RF05 P12081 | NM_001258041.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000448240.1 | HARS-201 | 1810 | 314aa | ENSP00000413605.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JWK3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000438307.2 | HARS-012 | 1789 | 469aa | ENSP00000411511.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58976 | D6RF05 P12081 | NM_001258040.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000307633.3 | HARS-008 | 1780 | 449aa | ENSP00000304668.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58977 | D6RF05 P12081 | NM_001258042.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000431330.2 | HARS-005 | 1774 | 395aa | ENSP00000393244.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E1C5 D6RF05 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000415192.2 | HARS-011 | 1401 | 435aa | ENSP00000411085.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DDD8 D6RF05 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000507746.1 | HARS-006 | 950 | 288aa | ENSP00000425889.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DEA2 D6RF05 E7ETE2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000512396.1 | HARS-014 | 580 | 60aa | ENSP00000421576.1 | Nonsense mediated decay | D6RF05 | - | - | |
| ENST00000506579.1 | HARS-002 | 3482 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000518126.1 | HARS-017 | 830 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000502888.1 | HARS-015 | 631 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000509087.1 | HARS-016 | 619 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
