Description
DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 [Source:HGNC Symbol;Acc:18700]
Gene Synonyms
VASA
Location
Chromosome 5: 55,033,845-55,112,985 forward strand.
GRCh37:CM000667.1
About this gene
This gene has 14 transcripts (splice variants) and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000505374.1 | DDX4-001 | 2884 | 724aa | ENSP00000424838.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3969 | D6RAF5 D6RBL3 Q9NQI0 | NM_024415.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000353507.5 | DDX4-201 | 2778 | 690aa | ENSP00000334167.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47208 | D6RAF5 Q9NQI0 | NM_001142549.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000514278.2 | DDX4-202 | 2451 | 704aa | ENSP00000425359.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54854 | D6RAF5 D6RCM4 Q9NQI0 | NM_001166533.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000354991.5 | DDX4-003 | 2324 | 690aa | ENSP00000347087.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47208 | D6RAF5 Q9NQI0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000511853.1 | DDX4-005 | 1984 | 575aa | ENSP00000423123.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54855 | Q9NQI0 | NM_001166534.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000506511.1 | DDX4-002 | 1631 | 518aa | ENSP00000427167.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAF5 D6RCM4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000506848.1 | DDX4-006 | 567 | 105aa | ENSP00000421960.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAF5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000514679.1 | DDX4-007 | 566 | 159aa | ENSP00000424112.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAF5 D6RBL3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000511491.1 | DDX4-008 | 549 | 156aa | ENSP00000427522.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RIB2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000515709.1 | DDX4-009 | 470 | 142aa | ENSP00000424779.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAT7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503129.1 | DDX4-004 | 1684 | 305aa | ENSP00000423102.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000507645.1 | DDX4-011 | 554 | 50aa | ENSP00000430431.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000508580.1 | DDX4-010 | 600 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000509312.2 | DDX4-013 | 486 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
