Description
SH3 domain and tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:29427]
Gene Synonyms
CMT4C, KIAA1985, MNMN
Location
Chromosome 5: 148,303,202-148,442,726 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 17 transcripts (splice variants), 1 paralogue and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000515425.1 | SH3TC2-001 | 4059 | 1288aa | ENSP00000423660.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4293 | B3KXB9 Q8TF17 | NM_024577.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000538184.1 | SH3TC2-202 | 4153 | 726aa | ENSP00000441427.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYY0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000512049.1 | SH3TC2-005 | 4002 | 1281aa | ENSP00000421860.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KXB9 Q14CC0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000394358.2 | SH3TC2-201 | 3276 | 934aa | ENSP00000377886.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JLC3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000502274.1 | SH3TC2-011 | 2681 | 150aa | ENSP00000421092.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8TF17 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000323829.5 | SH3TC2-004 | 7324 | 227aa | ENSP00000313025.5 | Nonsense mediated decay | D6RA65 | - | - | |
| ENST00000504690.1 | SH3TC2-012 | 4416 | 1259aa | ENSP00000425627.1 | Nonsense mediated decay | E9PDF1 | - | - | |
| ENST00000504517.1 | SH3TC2-009 | 4153 | 141aa | ENSP00000421779.1 | Nonsense mediated decay | H0Y8Q9 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000513604.1 | SH3TC2-007 | 4051 | 227aa | ENSP00000423111.1 | Nonsense mediated decay | D6RA65 | - | - | |
| ENST00000511307.1 | SH3TC2-003 | 3276 | 95aa | ENSP00000421420.1 | Nonsense mediated decay | D6RFX2 | - | - | |
| ENST00000510779.1 | SH3TC2-010 | 3077 | 37aa | ENSP00000423940.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000513340.1 | SH3TC2-018 | 721 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000515229.1 | SH3TC2-016 | 712 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000503071.1 | SH3TC2-017 | 570 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000510350.1 | SH3TC2-015 | 316 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000504091.1 | SH3TC2-006 | 4522 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000511949.1 | SH3TC2-013 | 573 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
