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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SLIT2 ENSG00000145147

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Description

slit homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11086]

Gene Synonyms

SLIL3, Slit-2

Location

Chromosome 4: 20,254,883-20,622,184 forward strand.

GRCh37:CM000666.1

About this gene

This gene has 11 transcripts (splice variants), 194 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000504154.1	SLIT2-001	6390	1529aa	ENSP00000422591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3426	B3KNE2 O94813 Q4W5K2 Q4W5N0	NM_004787.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000503823.1	SLIT2-002	5233	1521aa	ENSP00000427548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KNE2 O94813 Q4W5K2 Q4W5N0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000273739.5	SLIT2-004	5132	1542aa	ENSP00000273739.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KNE2 Q4W5K2 Q4W5N0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000503837.1	SLIT2-003	4752	1525aa	ENSP00000422261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KNE2 O94813 Q4W5K2 Q4W5N0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000511508.1	SLIT2-012	767	212aa	ENSP00000421975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0U4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000509941.1	SLIT2-010	739	196aa	ENSP00000425609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508824.1	SLIT2-006	532	146aa	ENSP00000426356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PCX4 Q4W5N0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512993.1	SLIT2-011	394	82aa	ENSP00000423179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000509394.2	SLIT2-009	712	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508541.1	SLIT2-005	2947	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509099.1	SLIT2-008	443	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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