Description
phosphodiesterase 6B, cGMP-specific, rod, beta [Source:HGNC Symbol;Acc:8786]
Gene Synonyms
CSNB3, CSNBAD2, PDEB, RP40, rd1
Location
Chromosome 4: 619,373-664,571 forward strand.
GRCh37:CM000666.1
About this gene
This gene has 12 transcripts (splice variants), 8 paralogues and is associated with 6 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000496514.1 | PDE6B-002 | 3232 | 854aa | ENSP00000420295.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33932 | C9J628 H7C4P9 P35913 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000255622.6 | PDE6B-001 | 3280 | 853aa | ENSP00000255622.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54703 | C9J628 H7C4P9 P35913 | NM_001145291.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000429163.2 | PDE6B-003 | 2120 | 575aa | ENSP00000406334.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46993 | C9J628 H7C4P9 P35913 | NM_001145292.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000471824.2 | PDE6B-011 | 580 | 144aa | ENSP00000417852.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C4P9 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000488061.1 | PDE6B-008 | 560 | 6aa | ENSP00000420228.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000461490.1 | PDE6B-012 | 549 | 149aa | ENSP00000417178.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000487902.1 | PDE6B-006 | 522 | 97aa | ENSP00000418256.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J628 C9J7V6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000465426.1 | PDE6B-007 | 450 | 41aa | ENSP00000418454.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J628 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000476034.1 | PDE6B-009 | 1012 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467152.1 | PDE6B-004 | 545 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460119.1 | PDE6B-010 | 541 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000474251.1 | PDE6B-005 | 512 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
