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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCCB ENSG00000114054

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Description

propionyl CoA carboxylase, beta polypeptide [Source:HGNC Symbol;Acc:8654]

Location

Chromosome 3: 135,969,148-136,056,738 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 19 transcripts (splice variants), 1 paralogue and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000469217.1	PCCB-003	1841	559aa	ENSP00000419027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54643	P05166 Q8WVH4	NM_001178014.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000471595.1	PCCB-002	6090	550aa	ENSP00000417549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAW3 C9JVW9 E9PDR0 Q59GV0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000478469.1	PCCB-006	4502	303aa	ENSP00000420759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAW3 C9JVW9 E7ENC1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000468777.1	PCCB-009	1877	570aa	ENSP00000419129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EX59 Q8WVH4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000466072.1	PCCB-011	1844	559aa	ENSP00000420158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAW3 C9JQS9 C9JVW9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000251654.4	PCCB-001	1833	539aa	ENSP00000251654.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3089	C9JAW3 C9JVW9 P05166 Q8WVH4	NM_000532.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000483687.1	PCCB-008	1727	520aa	ENSP00000420639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETT1 Q8WVH4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000462637.1	PCCB-010	1715	516aa	ENSP00000420391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUY3 Q8WVH4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000490504.1	PCCB-007	1613	482aa	ENSP00000418307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETT4 Q8WVH4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000482086.1	PCCB-013	1436	423aa	ENSP00000417253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PEC3 Q8WVH4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000465423.1	PCCB-014	582	191aa	ENSP00000419263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JVY9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494742.1	PCCB-018	547	84aa	ENSP00000418020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAW3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000459873.1	PCCB-019	534	133aa	ENSP00000419293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAW3 C9JVW9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462542.1	PCCB-017	488	163aa	ENSP00000419563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAW3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000484181.1	PCCB-012	1683	405aa	ENSP00000417937.1	Nonsense mediated decay		C9JAW3 C9JVW9 F8WBI9	-	-
ENST00000474833.1	PCCB-016	921	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465176.1	PCCB-020	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473073.1	PCCB-005	1964	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475214.1	PCCB-004	1295	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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