Description
peroxisomal biogenesis factor 5 [Source:HGNC Symbol;Acc:9719]
Gene Synonyms
PBD2A, PBD2B, PTS1-BP, PTS1R, PXR1
Location
Chromosome 12: 7,341,281-7,371,170 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 20 transcripts (splice variants), 1 paralogue and is associated with 9 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000434354.2 | PEX5-003 | 2253 | 654aa | ENSP00000407401.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44822 | F5GYB4 F5GZ41 F5H0L9 P50542 | NM_001131023.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000266563.5 | PEX5-002 | 3252 | 602aa | ENSP00000266563.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44824 | B4DWW0 F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H432 P50542 | NM_001131024.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000266564.3 | PEX5-006 | 3170 | 631aa | ENSP00000266564.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8576 | F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H3X7 F5H432 P50542 | NM_000319.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000455147.2 | PEX5-001 | 2689 | 639aa | ENSP00000400647.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44823 | F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H3X7 F5H432 P50542 | NM_001131026.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000420616.2 | PEX5-004 | 2477 | 639aa | ENSP00000410159.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44823 | F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H3X7 F5H432 P50542 | NM_001131025.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000412720.2 | PEX5-005 | 2105 | 660aa | ENSP00000391601.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E0T2 F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H3X7 F5H432 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000396637.3 | PEX5-013 | 1508 | 410aa | ENSP00000379877.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYB4 F5GZ41 F5H0L9 J3KPV0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545574.1 | PEX5-012 | 878 | 272aa | ENSP00000443500.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYB4 F5GZ41 F5H0L9 F5H5C0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000542539.1 | PEX5-008 | 848 | 248aa | ENSP00000439025.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXX3 F5GYB4 F5GZ41 F5H0L9 F5H205 F5H3X7 F5H432 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000540398.1 | PEX5-009 | 641 | 102aa | ENSP00000438494.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H432 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000544456.1 | PEX5-011 | 579 | 104aa | ENSP00000440833.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXX3 F5H432 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000536883.1 | PEX5-007 | 575 | 115aa | ENSP00000441553.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ41 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000536841.1 | PEX5-014 | 567 | 114aa | ENSP00000445630.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXX3 F5H205 F5H432 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545845.1 | PEX5-016 | 562 | 128aa | ENSP00000440711.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYB4 F5GZ41 F5H0L9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543974.1 | PEX5-010 | 548 | 118aa | ENSP00000438772.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ41 F5H0L9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000537873.1 | PEX5-015 | 522 | 168aa | ENSP00000437938.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXX3 F5H205 F5H432 F5H637 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000541850.1 | PEX5-020 | 386 | 31aa | ENSP00000444787.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000545220.1 | PEX5-017 | 553 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000539304.1 | PEX5-018 | 708 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000535486.2 | PEX5-019 | 560 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
