Description
PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:9121]
Gene Synonyms
HNPCC3, PMSL1, hPMS1
Location
Chromosome 2: 190,649,107-190,742,355 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 19 transcripts (splice variants), 1 paralogue and is associated with 61 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000441310.2 | PMS1-001 | 3225 | 932aa | ENSP00000406490.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2302 | B7ZAA0 C9J4L1 C9JF76 C9JKP0 P54277 Q5FBZ2 | NM_000534.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000418224.3 | PMS1-201 | 3012 | 756aa | ENSP00000404492.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7ZAA0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000409823.3 | PMS1-003 | 2795 | 893aa | ENSP00000387125.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46474 | C9J4L1 C9JF76 C9JKP0 P54277 Q5FBZ1 | NM_001128143.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000432292.3 | PMS1-202 | 2659 | 756aa | ENSP00000398378.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7ZAA0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000447232.2 | PMS1-010 | 2576 | 770aa | ENSP00000401064.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46473 | C9J4L1 C9JF76 C9JKP0 I6L9H5 P54277 Q5FBZ2 | NM_001128144.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000424307.1 | PMS1-006 | 2153 | 711aa | ENSP00000389938.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JKP0 E9PC65 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000409985.1 | PMS1-004 | 1882 | 181aa | ENSP00000386623.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J4L1 C9JKP0 E9PC40 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000409593.1 | PMS1-011 | 1668 | 555aa | ENSP00000387169.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P54277 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000374826.4 | PMS1-007 | 948 | 165aa | ENSP00000363959.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J4L1 C9JKP0 Q5XG96 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000452382.1 | PMS1-016 | 881 | 266aa | ENSP00000396232.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PH88 Q68DF0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000424766.1 | PMS1-014 | 831 | 194aa | ENSP00000410082.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J4L1 C9JF76 C9JKP0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000446877.1 | PMS1-013 | 560 | 44aa | ENSP00000413837.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JKP0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000420421.1 | PMS1-015 | 331 | 73aa | ENSP00000391136.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J4L1 C9JKP0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000342075.4 | PMS1-005 | 3012 | 108aa | ENSP00000343888.4 | Nonsense mediated decay | C9J4L1 C9JKP0 F8W8L1 | - | - | |
| ENST00000450931.1 | PMS1-002 | 2817 | 659aa | ENSP00000406225.1 | Nonsense mediated decay | C9J4L1 C9JF76 C9JKP0 Q3BDU3 Q5FBZ1 | - | - | |
| ENST00000447734.1 | PMS1-008 | 570 | 47aa | ENSP00000411151.1 | Nonsense mediated decay | C9JKP0 Q5FBZ7 | - | - | |
| ENST00000421722.1 | PMS1-012 | 2285 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000424059.1 | PMS1-009 | 2004 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000483293.1 | PMS1-017 | 663 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
