Description
solute carrier family 13 (sodium-dependent citrate transporter), member 5 [Source:HGNC Symbol;Acc:23089]
Gene Synonyms
NACT
Location
Chromosome 17: 6,588,032-6,616,886 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 12 transcripts (splice variants), 4 paralogues and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000433363.2 | SLC13A5-001 | 3435 | 568aa | ENSP00000406220.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11079 | I3L4V4 Q68D44 Q6ZMG6 Q86YT5 | NM_177550.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000293800.6 | SLC13A5-004 | 3176 | 551aa | ENSP00000293800.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS67137 | B3KXR0 Q68D44 Q6ZMG6 | NM_001284509.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000381074.4 | SLC13A5-003 | 1738 | 525aa | ENSP00000370464.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS67136 | F8W7N2 Q68D44 Q6ZMG6 | NM_001284510.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000573648.1 | SLC13A5-002 | 1723 | 522aa | ENSP00000459372.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45593 | I3L4V4 Q86YT5 | NM_001143838.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000572727.1 | SLC13A5-011 | 618 | 206aa | ENSP00000466899.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7END6 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000576323.1 | SLC13A5-010 | 574 | 137aa | ENSP00000461554.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4V4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000572352.1 | SLC13A5-013 | 538 | 167aa | ENSP00000461622.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4X6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000570687.1 | SLC13A5-012 | 419 | 94aa | ENSP00000460037.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000572094.1 | SLC13A5-014 | 986 | 81aa | ENSP00000461495.1 | Nonsense mediated decay | I3L4S9 | - | - | |
| ENST00000575230.1 | SLC13A5-008 | 547 | 91aa | ENSP00000460903.1 | Nonsense mediated decay | I3L424 | - | - | |
| ENST00000574580.1 | SLC13A5-007 | 5360 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574824.1 | SLC13A5-005 | 2506 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
