Gene: LTA ENSG00000226979

Description

lymphotoxin alpha [Source:HGNC Symbol;Acc:6709]

Gene Synonyms

LT, TNFB, TNFSF1

Location

GRCh37:CM000668.1

View alleles of this gene on alternative sequences

About this gene

This gene has 4 transcripts (splice variants), 1 gene allele, 4 paralogues and is associated with 2 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000454783.1	LTA-002	1507	205aa	ENSP00000403495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4701	P01374 Q45NE9 Q5STV3 Q6WQV6	NM_001159740.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000418386.2	LTA-001	1422	205aa	ENSP00000413450.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4701	P01374 Q45NE9 Q5STV3 Q6WQV6	NM_000595.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000471842.1	LTA-004	1497	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489638.1	LTA-003	1377	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary