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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATXN7L3 ENSG00000087152

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Description

ataxin 7-like 3 [Source:HGNC Symbol;Acc:25416]

Gene Synonyms

DKFZp761G2113

Location

Chromosome 17: 42,269,173-42,277,481 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 12 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000454077.2	ATXN7L3-003	3523	354aa	ENSP00000397259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45697	B4DKS1 K7EJK2 K7EMZ3 K7ENZ2 Q14CW9	NM_020218.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389384.4	ATXN7L3-001	3811	347aa	ENSP00000374035.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42345	B4DKS1 K7EJK2 K7EKG9 K7EMZ3 K7ENZ2 Q14CW9	NM_001098833.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591295.1	ATXN7L3-009	3017	186aa	ENSP00000467092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DKS1 K7EJK2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587097.1	ATXN7L3-002	1341	308aa	ENSP00000465614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJK2 K7EKG9 K7EMZ3 K7ENZ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589805.1	ATXN7L3-011	622	139aa	ENSP00000466717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMZ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590169.1	ATXN7L3-004	593	147aa	ENSP00000467153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMZ3 K7ENZ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590537.1	ATXN7L3-006	539	72aa	ENSP00000465210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJK2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593073.1	ATXN7L3-012	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589607.1	ATXN7L3-007	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591807.1	ATXN7L3-008	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586688.1	ATXN7L3-010	468	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587022.1	ATXN7L3-005	298	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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