Gene: SFTPA1 ENSG00000122852

Description

surfactant protein A1 [Source:HGNC Symbol;Acc:10798]

Gene Synonyms

COLEC4, COLEC5, PSAP, PSP-A, PSPA, SFTP1, SFTPA, SFTPA1B, SFTPA2B, SP-A, SP-A1, SPA, SPA1, SPA2, SPAII

Location

Chromosome 10: 81,370,695-81,375,196 forward strand.

GRCh37:CM000672.1

About this gene

This gene has 8 transcripts (splice variants), 5 paralogues and is associated with 3 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000419470.2	SFTPA1-008	953	263aa	ENSP00000397082.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44444	B4DNR9 B4DNW5 B7Z4Y4 J3KPA7 Q8IWL2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000398636.3	SFTPA1-203	2212	248aa	ENSP00000381633.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44445	B4DNR9 B4DNW5 B7Z4Y4 J3KPA7 Q8IWL2	NM_005411.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000428376.2	SFTPA1-204	2141	248aa	ENSP00000411102.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44445	B4DNR9 B4DNW5 B7Z4Y4 J3KPA7 Q8IWL2	NM_001164647.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372313.5	SFTPA1-202	1015	189aa	ENSP00000361387.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNW5 B7Z4Y4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372308.3	SFTPA1-201	865	245aa	ENSP00000361382.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KPA7	NM_001093770.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000439264.1	SFTPA1-009	596	158aa	ENSP00000401649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IWL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429958.1	SFTPA1-007	527	158aa	ENSP00000395527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IWL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000486922.1	SFTPA1-011	342	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SFTPA1 ENSG00000122852

Summary