Gene: NFYC ENSG00000066136

Description

nuclear transcription factor Y, gamma [Source:HGNC Symbol;Acc:7806]

Gene Synonyms

CBF-C, CBFC, H1TF2A, HAP5, HSM, NF-YC

Location

Chromosome 1: 41,157,320-41,237,275 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 24 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000425457.2	NFYC-015	1536	354aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44120	E9PJA8 E9PQR2 Q13952 Q14497 Q5T6K7	NM_001142588.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372652.1	NFYC-004	2363	439aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJA8 E9PQR2 Q13952 Q14497 Q5T6K7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000308733.5	NFYC-007	2158	458aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJA8 E9PQR2 Q13952 Q14497 Q5T6K7 Q8TCN9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000447388.3	NFYC-001	1950	335aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS455	E9PJA8 E9PQR2 Q13952 Q14497 Q5T6K7	NM_014223.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000456393.2	NFYC-017	1911	334aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44121	E9PJA8 E9PQR2 Q13952 Q14497 Q5T6K7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372653.1	NFYC-003	1862	301aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44122	E9PJA8 E9PQR2 Q13952 Q14497 Q5T6K7	NM_001142590.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000440226.3	NFYC-011	1717	335aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS455	E9PJA8 E9PQR2 Q13952 Q14497 Q5T6K7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372654.1	NFYC-005	1455	335aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS455	E9PJA8 E9PQR2 Q13952 Q14497 Q5T6K7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000427410.2	NFYC-002	1379	297aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44123	E9PJA8 Q13952 Q14497	NM_001142589.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372651.1	NFYC-006	1202	335aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS455	E9PJA8 E9PQR2 Q13952 Q14497 Q5T6K7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372669.4	NFYC-012	1005	313aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJA8 E9PQR2 Q14497 Q5T6K5 Q5T6K7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414185.1	NFYC-016	677	186aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000453631.1	NFYC-010	650	129aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJA8 E9PQR2 Q14497 Q5T6K7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534399.1	NFYC-020	574	52aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJA8 Q14497	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416859.2	NFYC-025	547	179aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIG7 E9PJA8 E9PQR2 Q14497	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531464.1	NFYC-021	525	60aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJA8 E9PQR2 Q14497	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525290.1	NFYC-022	433	141aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI99 E9PJA8 E9PQR2 Q14497 Q5T6K7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000530965.1	NFYC-024	293	95aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PL11 Q14497	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000483091.1	NFYC-014	264	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496608.1	NFYC-009	1965	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488635.1	NFYC-008	1481	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000424419.2	NFYC-018	1276	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467203.1	NFYC-013	943	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525349.1	NFYC-023	582	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

NFYC (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q13952

CCDS

This gene is a member of the Human CCDS set: CCDS44120.1, CCDS44121.1, CCDS44122.1, CCDS44123.1, CCDS455.1

Ensembl version

ENSG00000066136.15

Other assemblies

This gene maps to 40,691,648-40,771,603 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000007729 (version 4)

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Gene: NFYC ENSG00000066136

Summary