Description
paired box 2 [Source:HGNC Symbol;Acc:8616]
Gene Synonyms
PAPRS
Location
Chromosome 10: 102,495,360-102,589,698 forward strand.
GRCh37:CM000672.1
About this gene
This gene has 10 transcripts (splice variants), 254 orthologues, 51 paralogues and is associated with 7 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000428433.1 | PAX2-202 | 4126 | 417aa | ENSP00000396259.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53569 | Q02962 Q5SZP1 | NM_003990.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000370296.2 | PAX2-201 | 4209 | 419aa | ENSP00000359319.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q02962 Q5SZP1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000355243.3 | PAX2-001 | 4056 | 394aa | ENSP00000347385.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41561 | Q02962 | NM_003989.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000361791.3 | PAX2-002 | 3516 | 396aa | ENSP00000355069.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7499 | Q02962 | NM_003988.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000554172.1 | PAX2-005 | 1748 | 303aa | ENSP00000452489.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5S4 Q6YFJ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000556085.1 | PAX2-006 | 1253 | 393aa | ENSP00000452527.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5U4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000427256.1 | PAX2-003 | 677 | 214aa | ENSP00000398652.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5SZP1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000554363.1 | PAX2-007 | 582 | 35aa | ENSP00000452429.1 | Nonsense mediated decay | G3V5M8 | - | - | |
| ENST00000553492.1 | PAX2-008 | 507 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000483202.2 | PAX2-004 | 1216 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
