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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: MGAT5B ENSG00000167889

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Description

mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [Source:HGNC Symbol;Acc:24140]

Gene Synonyms

FLJ25132, GnT-IX, GnT-VB, KIAA2008

Location

Chromosome 17: 74,864,538-74,946,475 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 9 transcripts (splice variants), 272 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000428789.2	MGAT5B-002	4053	801aa	ENSP00000391227.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45788	Q3V5L5	NM_198955.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000569840.2	MGAT5B-010	4492	792aa	ENSP00000456037.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59299	H3BR20 Q3V5L5	NM_001199172.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000301618.4	MGAT5B-001	4486	790aa	ENSP00000301618.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11751	H3BR20 Q3V5L5	NM_144677.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000565675.1	MGAT5B-003	872	110aa	ENSP00000457614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BR20	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000565043.1	MGAT5B-004	2923	483aa	ENSP00000455631.1	Nonsense mediated decay		H3BQ65	-	-
ENST00000374998.3	MGAT5B-005	1661	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563153.1	MGAT5B-009	904	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563627.1	MGAT5B-008	629	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568598.1	MGAT5B-006	2212	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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