Description
neurexin 1 [Source:HGNC Symbol;Acc:8008]
Gene Synonyms
Hs.22998, KIAA0578, PTHSL2, SCZD17
Location
Chromosome 2: 50,145,643-51,259,674 reverse strand.
GRCh37:CM000664.1
About this gene
This gene has 17 transcripts (splice variants), 9 paralogues and is associated with 6 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000404971.1 | NRXN1-002 | 7578 | 1547aa | ENSP00000385142.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46282 | Q08AH0 Q9ULB1 | NM_001135659.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000406316.2 | NRXN1-001 | 7505 | 1477aa | ENSP00000384311.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54360 | Q08AH0 Q9ULB1 | NM_004801.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000401669.2 | NRXN1-003 | 5816 | 1507aa | ENSP00000385017.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ERL8 Q08AH0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000405472.3 | NRXN1-010 | 5728 | 1499aa | ENSP00000434015.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A7E294 Q08AH0 Q9ULB1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000342183.5 | NRXN1-012 | 5573 | 442aa | ENSP00000341184.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1845 | P58400 Q08AH0 | NM_138735.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000405581.1 | NRXN1-004 | 5494 | 278aa | ENSP00000385310.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EQN4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000402717.3 | NRXN1-201 | 4500 | 1499aa | ENSP00000385434.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYC7 Q08AH0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000406859.3 | NRXN1-202 | 4434 | 1477aa | ENSP00000385681.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8WB18 Q08AH0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000401710.1 | NRXN1-015 | 3157 | 495aa | ENSP00000385580.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ETA5 Q08AH0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000412315.1 | NRXN1-016 | 2227 | 210aa | ENSP00000396738.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000378262.3 | NRXN1-017 | 2028 | 144aa | ENSP00000367510.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000331040.5 | NRXN1-006 | 3044 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000484192.1 | NRXN1-011 | 2181 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000495871.1 | NRXN1-008 | 506 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000462791.1 | NRXN1-009 | 490 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496792.2 | NRXN1-005 | 447 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000474354.1 | NRXN1-014 | 574 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
